On iOS, at least, I don't think it's necessary to disable location services and that may even prevent your phone from using your GPS. Bad Elf says:
When you connect to any Bad Elf GPS product, it immediately starts feeding location data to your iPhone/iPad/iPod touch. Any app that needs location information will automatically be fed the more accurate location data, in most cases, the location data provided by the Bad Elf GPS. If you are intent on forcing your app to use only the Bad Elf GPS location data, you can turn on “airplane mode to disable the internal GPS chip. But keep in mind that this is entirely unnecessary. In general, you should just connect to the Bad Elf GPS and the rest is automatic.
Note that airplane mode doesn't turn of GPS in iOS 8.3. Also note that there is apparently a bug in iOS 8.3 which causes problems with some third party GPS units. According to MacRumors, the latest beta of 8.4 fixes this.

