Sounds like my story – evolved from a sleeping bag to quilts, never looked back.
Are you able to tuck in the quilt around the edges? I can reach under myself to make sure all the edges are sealed. I like that I can leave it all untucked in warmer weather like a blanket.
The things that turn a cold night to a warm night for me:
Eat – fats and carbs and don't hold the butter. If dinner was fairly early and bedtime was hours later, have a snack before bed. A cheese stick is usually perfect for me. I have a friend who packs a bag of coconut oil and eats a spoon of it before bed. He's slept out on snow or glaciers and says it revs up his metabolism if he gets a little cold.
Drink enough. Don't stop drinking to avoid getting up to pee. GET UP. Drink warm stuff an hour before bed. Getting up will warm you up again – it's exercise to put on a layer, exit the tent, wander around a bit and pee. I get warm immediately when I climb back in the quilt.
Exercise a little before bed. Seriously, a short walk or perhaps a little light exercise around camp – don't sweat, just move around some. Also, the more miles I've hiked (not fast, just plodding without lots of long lazy breaks) the warmer I tend to be all night. Exercise at home on a regular basis, exercise on the trail, a little bit before bed, and I'm good. Keep your motor tuned up.
Don't layer up so much. A friend insisted for years that her hypothyroid meant she had to use a 0 degree bag and wear six layers. She's found that doing the rest of my suggestions and taking off four of the layers really helped. Make sure your layer is DRY. Wet, even slightly damp, it'll pull the warmth off and leave you cold.
There is this phenomena that occurs where you feel colder than you are. Until you warm up the insulation of the quilt, it feels chilly to the touch. A hot water bottle (Nalgene, 16 oz is adequate and can double as a measuring cup or a mug for hot drinks) gets the footbox warm. Warm feet make the rest of you feel warm. After watching someone sweat so much on a 50F night that an entire baffle of a down quilt wet out COMPLETELY – after he kept me up all night whining about how cold he was! – I have a different perspective on the matter. I told him to go to the doctor. He found out a rash his doctor thought was eczema was actually a massive staph infection(!) so of course he had problems! Thyroid issues, metabolic issues or anything that affects your skin layers can make a huge difference. Sometimes a little medication and time goes a long way. If absolutely nothing works, it might be time for a blood panel and some checking. Chemical packs can be a godsend as well and might work better for waking up in the middle of the night instead of getting up to boil water.
Sometimes regardless of how warm it is when I get in, it feels chilly in spite of having my warm fleece hat on and some nice warm socks. So I do isometrics inside the quilt. Some time jogging in place (small movements) or pretending I'm riding the world's smallest bicycle for five minutes is all it takes. I never wear more than a midweight base layer to bed (other than the socks and hat).
I have inflatables that aren't typically understood to be good much beyond freezing, yet my original NeoAir (about six years old, and often complained about as being colder than rated) works fine for me still. A larger part of this issue is how you prepare for things. Hydrate well BEFORE the trip, hydrate better while on the trip, eat well, and exercise.