Couple of questions and comments, Nick. I only cut out the metal ring of the filter. Left the rest there. Did any water pour over the top of your cut-down filter?
Anyway, with murky water, the purpose of the prefilter for me is to get the dirty water that is going to be filtered by my .1 micron Sawyer filter – http://www.sawyer.com/SP122.htm to be prefiltered so that the Sawyer filter does not get immensely clogged up fast. The water that comes out of the Sawyer filter is then given a tablet of Chlorine Dioxide to deal with viruses, 20 minutes later, I can drink the water. With Beaver Bond, Silty water from Superior Hiking Trail, the water is still colored rusty color, but it tastes just fine.
Another SHT hiker, a married couple, they prefiltered their water with the same DuoDiesel filter (not my DuoDiesel filter, they had their own), then they used a Steripen to purify that water, and they drank that and had no complaints. I felt the water I drank was cleaner having been filtered down to .1 micron.
What were you doing with the water afterwards. After all, the word "pre-" in "pre-filter" presumes something is going to be filtering the water ultimately.